EnhancerDB
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  3. rs548566535[chr12:116946172]
Enhancers that have rs548566535[chr12:116946172]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116926365 116948935 enh43835
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Bone (Osteoblast) Stomach Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
chr12 116946088 116946451 vista15033
VISTA
Transcript factors that have rs548566535[chr12:116946172]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116945984 116946354 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21577139
chr12 116945984 116946354 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108061712
chr12 116946052 116946508 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21577140
chr12 116946052 116946508 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108061713
chr12 116946086 116946756 POLR2A UCSC Txn Factor no Conserved 108061714
chr12 116946086 116946756 POLR2A UCSC Txn Factor no Conserved 108061715
chr12 116946154 116946395 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21577141
chr12 116946154 116946395 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108061716
chr12 116946163 116946177 PLAG1 JASPAR yes 82483810
chr12 116946163 116946177 PLAG1 JASPAR yes 124004573
Genes associated with rs548566535[chr12:116946172], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More