EnhancerDB
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  3. rs548599855[chr1:224701017]
Enhancers that have rs548599855[chr1:224701017]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224679026 224701215 enh12719
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs548599855[chr1:224701017]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224701010 224701020 ZFHX3 TRANSFAC yes 35709379
chr1 224701011 224701026 HNF1A JASPAR yes 35709380
chr1 224701012 224701033 IRF1 JASPAR yes 35709381
Genes associated with rs548599855[chr1:224701017], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More