EnhancerDB
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  3. rs548623468[chr19:10838186]
Enhancers that have rs548623468[chr19:10838186]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10832365 10873258 enh5002
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs548623468[chr19:10838186]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10838175 10838190 SCRT1 JASPAR yes 112432228
chr19 10838179 10838188 SNAI2 JASPAR yes 112432229
chr19 10838179 10838189 FIGLA JASPAR yes 112432230
chr19 10838179 10838189 ID4 JASPAR yes 112432231
chr19 10838179 10838189 TCF3 JASPAR yes 112432232
chr19 10838179 10838189 TCF4 JASPAR yes 112432233
chr19 10838181 10838190 ZEB1 JASPAR yes 112432234
Genes associated with rs548623468[chr19:10838186], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More