EnhancerDB
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  3. rs548654074[chr17:59393381]
Enhancers that have rs548654074[chr17:59393381]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 59383635 59420035 enh17269
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs548654074[chr17:59393381]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 59393372 59393384 NHLH1 JASPAR yes 55147288
chr17 59393373 59393382 SNAI2 JASPAR yes 55147289
chr17 59393373 59393383 ID4 JASPAR yes 55147290
chr17 59393373 59393383 NHLH1 JASPAR yes 55147291
chr17 59393373 59393383 TCF3 JASPAR yes 55147292
chr17 59393373 59393383 TCF4 JASPAR yes 55147293
Genes associated with rs548654074[chr17:59393381], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More