EnhancerDB
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  3. rs548657888[chr11:72877208]
Enhancers that have rs548657888[chr11:72877208]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 72858805 72891557 enh1873
Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs548657888[chr11:72877208]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 72877201 72877212 CDX2 JASPAR yes 39733761
chr11 72877203 72877212 CDX1 JASPAR yes 39733762
chr11 72877203 72877213 HOXA13 JASPAR yes 39733763
chr11 72877203 72877213 HOXB13 JASPAR yes 39733764
chr11 72877203 72877213 HOXD13 JASPAR yes 39733765
chr11 72877205 72877209 TEAD2 TRANSFAC yes 39733766
chr11 72877205 72877210 TBP TRANSFAC yes 39733767
chr11 72877205 72877211 TFIID TRANSFAC yes 39733768
chr11 72877207 72877213 TBP TRANSFAC yes 39733769
Genes associated with rs548657888[chr11:72877208], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More