EnhancerDB
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  3. rs548680840[chr12:54821586]
Enhancers that have rs548680840[chr12:54821586]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54815065 54835675 enh14748
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs548680840[chr12:54821586]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54821372 54822106 ZNF143 GTRD no Epithelial (MCF-7) 21550552
chr12 54821579 54821599 RREB1 JASPAR yes 121040965
chr12 54821584 54821594 SP1 JASPAR yes 121040966
chr12 54821585 54821595 ZNF740 JASPAR yes 121040967
Genes associated with rs548680840[chr12:54821586], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More