EnhancerDB
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  3. rs548684943[chr1:21656719]
Enhancers that have rs548684943[chr1:21656719]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21624465 21668955 enh110
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs548684943[chr1:21656719]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21656713 21656734 IRF1 JASPAR yes 27297012
chr1 21656715 21656730 PRDM1 JASPAR yes 27297013
chr1 21656715 21656730 STAT2 JASPAR yes 27297014
chr1 21656715 21656736 IRF1 JASPAR yes 27297015
chr1 21656716 21656737 IRF1 JASPAR yes 27297016
chr1 21656717 21656738 IRF1 JASPAR yes 27297017
chr1 21656718 21656733 FOXP1 JASPAR yes 27297018
chr1 21656718 21656739 IRF1 JASPAR yes 27297019
chr1 21656719 21656734 FOXP1 JASPAR yes 27297020
chr1 21656719 21656740 IRF1 JASPAR yes 27297021
Genes associated with rs548684943[chr1:21656719], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More