EnhancerDB
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  3. rs548685352[chr3:149346524]
Enhancers that have rs548685352[chr3:149346524]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 149341585 149368662 enh21023
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs548685352[chr3:149346524]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 149346509 149346530 IRF1 JASPAR yes 6516503
chr3 149346511 149346526 FOXP1 JASPAR yes 6516504
chr3 149346515 149346530 FOXP1 JASPAR yes 6516505
chr3 149346516 149346528 FOXC2 JASPAR yes 6516506
chr3 149346520 149346535 FOXP1 JASPAR yes 6516508
Genes associated with rs548685352[chr3:149346524], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More