EnhancerDB
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  3. rs548686837[chr15:55567828]
Enhancers that have rs548686837[chr15:55567828]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 55567262 55578776 enh31390
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Astrocyte Blood (GM12878) Stomach Colon (HCT116) Breast Uterus Peripheral Blood (MM.1S) Adrenal Lung (PC-9) Pancreas Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs548686837[chr15:55567828]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 55567813 55567833 RREB1 JASPAR yes 23498117
chr15 55567820 55567841 IRF1 JASPAR yes 23498118
chr15 55567821 55567836 FOXP1 JASPAR yes 23498119
chr15 55567824 55567838 SPIC JASPAR yes 23498120
chr15 55567824 55567838 STAT1 JASPAR yes 23498121
chr15 55567824 55567839 PRDM1 JASPAR yes 23498122
chr15 55567824 55567839 STAT2 JASPAR yes 23498123
chr15 55567824 55567845 IRF1 JASPAR yes 23498124
Genes associated with rs548686837[chr15:55567828], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More