EnhancerDB
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  3. rs548705680[chr12:56446432]
Enhancers that have rs548705680[chr12:56446432]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 56438391 56456078 enh2386
Bone Marrow (K562) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs548705680[chr12:56446432]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 56446413 56446434 IRF1 JASPAR yes 121088396
chr12 56446414 56446435 IRF1 JASPAR yes 121088397
chr12 56446419 56446434 FOXP1 JASPAR yes 121088398
chr12 56446423 56446438 STAT2 JASPAR yes 121088400
Genes associated with rs548705680[chr12:56446432], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More