EnhancerDB
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  3. rs548710540[chr11:126216821]
Enhancers that have rs548710540[chr11:126216821]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 126175745 126220415 enh14373
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs548710540[chr11:126216821]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 126216282 126217040 ZNF274 GTRD no Blood (GM12878) 21521814
chr11 126216373 126217002 ZNF274 GTRD no Blood (GM12878) 21521816
chr11 126216592 126217018 ZNF274 GTRD no Blood (GM12878) 21521817
chr11 126216597 126216887 ZNF274 GTRD no Blood (GM12878) 21521818
chr11 126216713 126217159 ZNF274 GTRD no Blood (GM12878) 21521819
chr11 126216817 126216832 FOXP1 JASPAR yes 42195534
chr11 126216820 126216826 TBP TRANSFAC yes 42195535
Genes associated with rs548710540[chr11:126216821], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More