EnhancerDB
  1. Home
  2. SNP
  3. rs548742693[chr6:138132494]
Enhancers that have rs548742693[chr6:138132494]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 138109536 138156015 enh23663
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
chr6 138131886 138133298 vista1496
VISTA
chr6 138132277 138133056 vista53756
VISTA
Transcript factors that have rs548742693[chr6:138132494]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 138132430 138133120 POLR2A UCSC Txn Factor no Conserved 107693967
chr6 138132430 138133120 POLR2A UCSC Txn Factor no Conserved 108541864
chr6 138132430 138133120 POLR2A UCSC Txn Factor no Conserved 108541865
chr6 138132486 138132496 HOXC10 JASPAR yes 22279643
chr6 138132486 138132496 HOXD11 JASPAR yes 22279644
chr6 138132486 138132496 HOXC10 JASPAR yes 70446960
chr6 138132486 138132496 HOXD11 JASPAR yes 70446961
chr6 138132486 138132496 HOXC10 JASPAR yes 105679637
chr6 138132486 138132496 HOXD11 JASPAR yes 105679638
chr6 138132486 138132497 HOXA10 JASPAR yes 22279645
chr6 138132486 138132497 HOXC11 JASPAR yes 22279646
chr6 138132486 138132497 HOXC12 JASPAR yes 22279647
chr6 138132486 138132497 HOXD12 JASPAR yes 22279648
chr6 138132486 138132497 HOXA10 JASPAR yes 70446962
chr6 138132486 138132497 HOXC11 JASPAR yes 70446963
chr6 138132486 138132497 HOXC12 JASPAR yes 70446964
chr6 138132486 138132497 HOXD12 JASPAR yes 70446965
chr6 138132486 138132497 HOXA10 JASPAR yes 105679639
chr6 138132486 138132497 HOXC11 JASPAR yes 105679640
chr6 138132486 138132497 HOXC12 JASPAR yes 105679641
chr6 138132486 138132497 HOXD12 JASPAR yes 105679642
chr6 138132486 138132902 RELA UCSC Txn Factor no Conserved 107693968
chr6 138132486 138132902 RELA UCSC Txn Factor no Conserved 108541866
chr6 138132487 138132497 GSX2 JASPAR yes 22279649
chr6 138132487 138132497 HOXB3 JASPAR yes 22279650
chr6 138132487 138132497 MEOX2 JASPAR yes 22279651
chr6 138132487 138132497 MNX1 JASPAR yes 22279652
chr6 138132487 138132497 GSX2 JASPAR yes 70446966
chr6 138132487 138132497 HOXB3 JASPAR yes 70446967
chr6 138132487 138132497 MEOX2 JASPAR yes 70446968
chr6 138132487 138132497 MNX1 JASPAR yes 70446969
chr6 138132487 138132497 GSX2 JASPAR yes 105679643
chr6 138132487 138132497 HOXB3 JASPAR yes 105679644
chr6 138132487 138132497 MEOX2 JASPAR yes 105679645
chr6 138132487 138132497 MNX1 JASPAR yes 105679646
chr6 138132488 138132496 NKX6-1 JASPAR yes 22279653
chr6 138132488 138132496 NKX6-1 JASPAR yes 70446970
chr6 138132488 138132496 NKX6-1 JASPAR yes 105679647
chr6 138132488 138132499 BATF JASPAR yes 22279654
chr6 138132488 138132499 BATF JASPAR yes 70446971
chr6 138132488 138132499 BATF JASPAR yes 105679648
Genes associated with rs548742693[chr6:138132494], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More