EnhancerDB
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  3. rs548747838[chr1:235001964]
Enhancers that have rs548747838[chr1:235001964]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234990369 235041235 enh12797
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs548747838[chr1:235001964]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235001729 235002085 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21399167
chr1 235001802 235002226 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21399168
chr1 235001871 235002191 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21399169
chr1 235001881 235002131 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21399170
chr1 235001888 235002461 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21399171
chr1 235001895 235002271 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21399172
chr1 235001899 235002249 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21399173
chr1 235001900 235002264 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21399174
chr1 235001900 235002528 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21399175
chr1 235001902 235002166 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21399176
chr1 235001908 235002152 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21399177
chr1 235001925 235002295 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21399178
chr1 235001933 235002369 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21399179
chr1 235001937 235002173 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21399180
chr1 235001937 235002487 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21399181
chr1 235001940 235002436 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21399182
chr1 235001952 235002272 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21399183
chr1 235001953 235002329 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21399184
chr1 235001953 235002503 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21399185
chr1 235001956 235002139 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21399186
chr1 235001961 235001970 NKX2-8 JASPAR yes 36322874
chr1 235001961 235001971 NKX2-3 JASPAR yes 36322875
chr1 235001962 235002166 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21399187
Genes associated with rs548747838[chr1:235001964], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More