EnhancerDB
  1. Home
  2. SNP
  3. rs548794296[chr16:85362713]
Enhancers that have rs548794296[chr16:85362713]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs548794296[chr16:85362713]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85360640 85362728 ZNF274 GTRD no Bone Marrow (K562) 21723650
chr16 85361571 85362759 ZNF274 GTRD no Bone Marrow (K562) 21723672
chr16 85362390 85366591 ZNF143 GTRD no Epithelial (MCF-7) 21723718
chr16 85362402 85362835 ZNF143 GTRD no Epithelial (MCF-7) 21723719
chr16 85362411 85362795 ZNF143 GTRD no Epithelial (MCF-7) 21723720
chr16 85362559 85362779 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21723721
chr16 85362569 85364020 TCF7L2 GTRD no Colon (HCT116) 21723722
chr16 85362620 85363060 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723723
chr16 85362702 85362992 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21723724
chr16 85362705 85362995 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723725
chr16 85362707 85362717 SP1 JASPAR yes 12048238
chr16 85362710 85362720 MZF1 JASPAR yes 12048239
chr16 85362710 85362731 ZNF263 JASPAR yes 12048240
chr16 85362710 85363060 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723726
chr16 85362711 85362725 PLAG1 JASPAR yes 12048241
chr16 85362711 85362732 ZNF263 JASPAR yes 12048242
chr16 85362712 85362722 SP1 JASPAR yes 12048243
chr16 85362713 85362719 SP1 TRANSFAC yes 12048244
chr16 85362713 85362723 SP1 JASPAR yes 12048245
Genes associated with rs548794296[chr16:85362713], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More