EnhancerDB
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  3. rs548806729[chr16:89536040]
Enhancers that have rs548806729[chr16:89536040]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89534745 89554855 enh32031
Liver Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs548806729[chr16:89536040]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89536033 89536044 FOSL2 JASPAR yes 12347648
chr16 89536035 89536048 SMAD2 JASPAR yes 12347649
chr16 89536038 89536048 TBR1 JASPAR yes 12347650
chr16 89536039 89536049 TBX21 JASPAR yes 12347651
chr16 89536040 89536048 MGA JASPAR yes 12347652
chr16 89536040 89536048 TBX15 JASPAR yes 12347653
chr16 89536040 89536048 TBX1 JASPAR yes 12347654
chr16 89536040 89536048 TBX4 JASPAR yes 12347655
chr16 89536040 89536048 TBX5 JASPAR yes 12347656
chr16 89536040 89536049 ZEB1 JASPAR yes 12347657
chr16 89536040 89536052 PKNOX1 JASPAR yes 12347658
chr16 89536040 89536052 TGIF1 JASPAR yes 12347659
chr16 89536040 89536053 ZBTB18 JASPAR yes 12347660
Genes associated with rs548806729[chr16:89536040], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More