EnhancerDB
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  3. rs548816367[chr17:49029560]
Enhancers that have rs548816367[chr17:49029560]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49015225 49039275 enh17224
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs548816367[chr17:49029560]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49029235 49029885 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771711
chr17 49029265 49029921 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21771712
chr17 49029338 49029734 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771713
chr17 49029346 49029850 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771714
chr17 49029358 49029718 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771715
chr17 49029364 49029768 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771716
chr17 49029376 49029760 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771717
chr17 49029379 49029669 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771718
chr17 49029384 49029754 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771719
chr17 49029387 49029714 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771720
chr17 49029398 49029862 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771721
chr17 49029406 49029686 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21771722
chr17 49029411 49029688 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771723
chr17 49029412 49029752 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771724
chr17 49029436 49029696 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771725
chr17 49029452 49029642 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21771727
chr17 49029486 49029566 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21771728
chr17 49029502 49029878 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771729
chr17 49029552 49029563 USF2 JASPAR yes 54738441
chr17 49029559 49029571 PKNOX1 JASPAR yes 54738442
chr17 49029559 49029571 PKNOX2 JASPAR yes 54738443
chr17 49029559 49029571 TGIF1 JASPAR yes 54738444
chr17 49029559 49029571 TGIF2 JASPAR yes 54738445
chr17 49029559 49029573 TLX1 JASPAR yes 54738446
chr17 49029560 49029570 MSC JASPAR yes 54738447
chr17 49029560 49029570 MYF6 JASPAR yes 54738448
Genes associated with rs548816367[chr17:49029560], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More