EnhancerDB
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  3. rs548827103[chr1:185626360]
Enhancers that have rs548827103[chr1:185626360]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185611645 185629075 enh12480
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs548827103[chr1:185626360]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185626342 185626362 RREB1 JASPAR yes 33831759
chr1 185626344 185626364 RREB1 JASPAR yes 33831760
chr1 185626348 185626368 RREB1 JASPAR yes 33831763
chr1 185626351 185626363 FOXI1 JASPAR yes 33831764
chr1 185626351 185626366 FOXP1 JASPAR yes 33831765
chr1 185626354 185626365 FOXA1 JASPAR yes 33831766
chr1 185626355 185626370 FOXP1 JASPAR yes 33831767
chr1 185626356 185626367 FOXP2 JASPAR yes 33831768
chr1 185626356 185626368 FOXC2 JASPAR yes 33831769
chr1 185626356 185626371 STAT2 JASPAR yes 33831770
chr1 185626357 185626372 FOXP1 JASPAR yes 33831771
chr1 185626360 185626375 FOXP1 JASPAR yes 33831772
Genes associated with rs548827103[chr1:185626360], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More