EnhancerDB
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  3. rs548844329[chr1:52108082]
Enhancers that have rs548844329[chr1:52108082]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52099919 52117655 enh11848
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Uterus Stomach Brain (SK-N-SH) Ovary Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs548844329[chr1:52108082]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52108067 52108082 MEF2A JASPAR yes 28858460
chr1 52108068 52108083 MEF2C JASPAR yes 28858461
chr1 52108070 52108083 DUXA JASPAR yes 28858463
chr1 52108071 52108082 PROP1 JASPAR yes 28858464
Genes associated with rs548844329[chr1:52108082], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More