EnhancerDB
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  3. rs548850578[chr17:78753711]
Enhancers that have rs548850578[chr17:78753711]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs548850578[chr17:78753711]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78753348 78754356 ZNF274 GTRD no Blood (GM12878) 21797286
chr17 78753348 78754356 ZNF274 GTRD no Blood (GM12878) 108307531
chr17 78753482 78754548 ZNF274 GTRD no Blood (GM12878) 21797287
chr17 78753482 78754548 ZNF274 GTRD no Blood (GM12878) 108307532
chr17 78753519 78754174 ZNF274 GTRD no Liver (HepG2) 108307533
chr17 78753535 78754338 ZNF274 GTRD no Blood (GM12878) 21797288
chr17 78753535 78754338 ZNF274 GTRD no Blood (GM12878) 108307534
chr17 78753537 78754308 ZNF274 GTRD no Blood (GM12878) 21797289
chr17 78753537 78754308 ZNF274 GTRD no Blood (GM12878) 108307535
chr17 78753663 78754344 ZNF274 GTRD no Bone Marrow (K562) 108307536
chr17 78753674 78754401 ZNF274 GTRD no Blood (GM12878) 21797290
chr17 78753674 78754401 ZNF274 GTRD no Blood (GM12878) 108307537
chr17 78753693 78754278 ZNF274 GTRD no Blood (GM12878) 21797291
chr17 78753693 78754278 ZNF274 GTRD no Blood (GM12878) 108307538
chr17 78753704 78754653 ZNF274 GTRD no Blood (GM12878) 21797292
chr17 78753704 78754653 ZNF274 GTRD no Blood (GM12878) 108307539
chr17 78753709 78753714 ETS2 TRANSFAC yes 56278363
Genes associated with rs548850578[chr17:78753711], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More