EnhancerDB
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  3. rs548862027[chr15:40356154]
Enhancers that have rs548862027[chr15:40356154]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40353665 40379655 enh16061
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs548862027[chr15:40356154]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40355755 40356231 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21649643
chr15 40355761 40356277 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21649644
chr15 40355781 40356311 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21649645
chr15 40355910 40356254 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21649647
chr15 40355914 40356244 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21649648
chr15 40355936 40356166 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21649649
chr15 40355938 40356194 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21649650
chr15 40355957 40356277 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21649651
chr15 40356152 40356165 SMAD2 JASPAR yes 22925070
Genes associated with rs548862027[chr15:40356154], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More