EnhancerDB
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  3. rs548871640[chr2:224598325]
Enhancers that have rs548871640[chr2:224598325]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 224585628 224603006 enh19263
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs548871640[chr2:224598325]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 224598306 224598327 IRF1 JASPAR yes 81282427
chr2 224598307 224598328 IRF1 JASPAR yes 81282428
chr2 224598312 224598327 MEF2A JASPAR yes 81282431
chr2 224598313 224598328 FOXP1 JASPAR yes 81282432
chr2 224598313 224598328 MEF2C JASPAR yes 81282433
chr2 224598313 224598334 IRF1 JASPAR yes 81282434
chr2 224598314 224598326 FOXC2 JASPAR yes 81282435
chr2 224598314 224598326 MEF2A JASPAR yes 81282436
chr2 224598314 224598326 MEF2B JASPAR yes 81282437
chr2 224598314 224598326 MEF2D JASPAR yes 81282438
chr2 224598315 224598325 MEF2A JASPAR yes 81282439
chr2 224598317 224598329 IRF1 JASPAR yes 81282441
chr2 224598317 224598331 IRF7 JASPAR yes 81282442
chr2 224598320 224598332 FOXC2 JASPAR yes 81282443
chr2 224598322 224598326 YY1 TRANSFAC yes 81282444
Genes associated with rs548871640[chr2:224598325], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More