EnhancerDB
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  3. rs548874498[chr17:4754793]
Enhancers that have rs548874498[chr17:4754793]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 4739171 4760073 enh16944
Bone Marrow (K562) Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs548874498[chr17:4754793]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 4754785 4754798 SMAD2 JASPAR yes 52858472
chr17 4754789 4754795 NFE2 TRANSFAC yes 52858473
chr17 4754791 4754805 GLIS2 JASPAR yes 52858474
chr17 4754791 4754805 GLIS3 JASPAR yes 52858475
chr17 4754791 4754805 ZIC1 JASPAR yes 52858476
chr17 4754791 4754806 ZIC3 JASPAR yes 52858477
chr17 4754791 4754806 ZIC4 JASPAR yes 52858478
Genes associated with rs548874498[chr17:4754793], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More