EnhancerDB
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  3. rs548908603[chr12:52594319]
Enhancers that have rs548908603[chr12:52594319]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr12 52594001 52594417 vista13462
VISTA
Transcript factors that have rs548908603[chr12:52594319]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52594210 52594486 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108033585
chr12 52594289 52594859 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546609
chr12 52594289 52594859 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108033586
chr12 52594296 52594403 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108033587
chr12 52594314 52594319 ETS2 TRANSFAC yes 82406405
chr12 52594314 52594319 ETS2 TRANSFAC yes 120926964
chr12 52594319 52594323 LFA1 TRANSFAC yes 82406406
chr12 52594319 52594323 LFA1 TRANSFAC yes 120926965
Genes associated with rs548908603[chr12:52594319], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More