EnhancerDB
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  3. rs548911827[chr17:55489378]
Enhancers that have rs548911827[chr17:55489378]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55477469 55505815 enh4487
Brain (SK-N-MC) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs548911827[chr17:55489378]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55489366 55489387 ZNF263 JASPAR yes 54952345
chr17 55489372 55489379 SP1 TRANSFAC yes 54952352
chr17 55489372 55489382 SP1 JASPAR yes 54952353
Genes associated with rs548911827[chr17:55489378], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More