EnhancerDB
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  3. rs548940235[chr3:177077613]
Enhancers that have rs548940235[chr3:177077613]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 177072994 177082626 enh7693
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr3 177077500 177078084 vista43264
VISTA
Transcript factors that have rs548940235[chr3:177077613]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 177074698 177078331 POLR2A UCSC Txn Factor no Conserved 108531115
chr3 177074698 177078331 POLR2A UCSC Txn Factor no Conserved 108531116
chr3 177074698 177078331 POLR2A UCSC Txn Factor no Conserved 108531117
chr3 177077551 177078033 MAZ UCSC Txn Factor no Conserved 108531133
chr3 177077568 177078084 CEBPB UCSC Txn Factor no Conserved 108531134
chr3 177077573 177078052 MYC UCSC Txn Factor no Conserved 108531135
chr3 177077576 177078130 EP300 UCSC Txn Factor no Conserved 108531136
chr3 177077589 177078056 NFIC UCSC Txn Factor no Conserved 108531137
chr3 177077590 177077966 CCNT2 UCSC Txn Factor no Conserved 108531138
chr3 177077601 177077981 CHD2 UCSC Txn Factor no Conserved 108531139
chr3 177077605 177077620 MEF2A JASPAR yes 7859722
chr3 177077605 177077620 MEF2A JASPAR yes 71090418
chr3 177077606 177077621 MEF2C JASPAR yes 7859723
chr3 177077606 177077621 MEF2C JASPAR yes 71090419
chr3 177077606 177078039 TCF12 UCSC Txn Factor no Conserved 108531140
chr3 177077609 177077613 YY1 TRANSFAC yes 7859724
chr3 177077609 177077613 YY1 TRANSFAC yes 71090420
chr3 177077609 177077949 NR3C1 UCSC Txn Factor no Conserved 108531141
Genes associated with rs548940235[chr3:177077613], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More