EnhancerDB
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  3. rs548968962[chr17:62200188]
Enhancers that have rs548968962[chr17:62200188]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62177725 62201515 enh17291
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs548968962[chr17:62200188]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62200182 62200197 HNF1A JASPAR yes 55280715
chr17 62200183 62200197 POU4F1 JASPAR yes 55280716
chr17 62200183 62200199 POU4F2 JASPAR yes 55280717
chr17 62200183 62200199 POU4F3 JASPAR yes 55280718
Genes associated with rs548968962[chr17:62200188], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More