EnhancerDB
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  3. rs548979162[chr1:203623142]
Enhancers that have rs548979162[chr1:203623142]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203594185 203628195 enh12562
Bone Marrow (K562) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs548979162[chr1:203623142]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203622492 203623646 ZNF274 GTRD no Bone Marrow (K562) 21369736
chr1 203622492 203623646 ZNF274 GTRD no Bone Marrow (K562) 107859228
chr1 203622517 203623152 ZNF274 GTRD no Bone Marrow (K562) 21369738
chr1 203622517 203623152 ZNF274 GTRD no Bone Marrow (K562) 107859230
chr1 203623131 203623152 IRF1 JASPAR yes 34651539
chr1 203623135 203623150 IRF9 JASPAR yes 34651540
Genes associated with rs548979162[chr1:203623142], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More