EnhancerDB
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  3. rs548993994[chr17:38678495]
Enhancers that have rs548993994[chr17:38678495]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs548993994[chr17:38678495]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38677450 38678654 TCF7L2 GTRD no Colon (HCT116) 21754927
chr17 38677450 38678654 TCF7L2 GTRD no Colon (HCT116) 108255508
chr17 38677450 38678654 TCF7L2 GTRD no Colon (HCT116) 108255509
chr17 38678340 38678653 ZNF274 GTRD no Bone Marrow (K562) 21754957
chr17 38678340 38678653 ZNF274 GTRD no Bone Marrow (K562) 108255559
chr17 38678396 38678720 ZNF274 GTRD no Bone Marrow (K562) 21754958
chr17 38678396 38678720 ZNF274 GTRD no Bone Marrow (K562) 108255560
chr17 38678420 38678765 ZNF274 GTRD no Bone Marrow (K562) 21754959
chr17 38678420 38678765 ZNF274 GTRD no Bone Marrow (K562) 108255561
chr17 38678475 38678495 RREB1 JASPAR yes 54221038
Genes associated with rs548993994[chr17:38678495], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More