EnhancerDB
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  3. rs549012888[chr17:65442071]
Enhancers that have rs549012888[chr17:65442071]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65424869 65443995 enh17322
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs549012888[chr17:65442071]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65442060 65442081 IRF1 JASPAR yes 55505352
chr17 65442061 65442076 RUNX2 JASPAR yes 55505353
chr17 65442064 65442078 ONECUT3 JASPAR yes 55505354
Genes associated with rs549012888[chr17:65442071], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More