EnhancerDB
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  3. rs549017408[chr5:90605696]
Enhancers that have rs549017408[chr5:90605696]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90595425 90613326 enh22427
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549017408[chr5:90605696]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90605678 90605696 RARA JASPAR yes 64191255
chr5 90605692 90605703 CEBPB JASPAR yes 64191260
chr5 90605693 90605703 CEBPB JASPAR yes 64191261
chr5 90605693 90605703 CEBPD JASPAR yes 64191262
chr5 90605693 90605703 CEBPE JASPAR yes 64191263
chr5 90605693 90605703 CEBPG JASPAR yes 64191264
chr5 90605693 90605704 CEBPA JASPAR yes 64191265
Genes associated with rs549017408[chr5:90605696], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More