EnhancerDB
  1. Home
  2. SNP
  3. rs549020879[chr2:25516687]
Enhancers that have rs549020879[chr2:25516687]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 25506105 25541255 enh18357
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Esophagus Placenta Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs549020879[chr2:25516687]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 25516678 25516694 T JASPAR yes 72462870
chr2 25516679 25516691 TEAD1 JASPAR yes 72462871
Genes associated with rs549020879[chr2:25516687], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More