EnhancerDB
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  3. rs549041289[chr16:19154467]
Enhancers that have rs549041289[chr16:19154467]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 19138245 19156894 enh16588
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549041289[chr16:19154467]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 19154464 19154479 FOXP1 JASPAR yes 9853889
chr16 19154465 19154480 FOXP1 JASPAR yes 9853890
chr16 19154466 19154481 FOXP1 JASPAR yes 9853891
chr16 19154466 19154487 IRF1 JASPAR yes 9853892
chr16 19154467 19154482 FOXP1 JASPAR yes 9853893
chr16 19154467 19154488 IRF1 JASPAR yes 9853894
Genes associated with rs549041289[chr16:19154467], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More