EnhancerDB
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  3. rs549051726[chr1:225650688]
Enhancers that have rs549051726[chr1:225650688]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549051726[chr1:225650688]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225650484 225651098 ZBTB33 GTRD no Brain (SK-N-SH) 21384814
chr1 225650680 225650695 NFYB JASPAR yes 35743564
chr1 225650682 225650698 NFYA JASPAR yes 35743565
chr1 225650683 225650701 NFYA JASPAR yes 35743566
chr1 225650684 225650696 PBX1 JASPAR yes 35743567
chr1 225650684 225650704 RREB1 JASPAR yes 35743568
chr1 225650687 225650691 H1TF2 TRANSFAC yes 35743569
chr1 225650687 225650691 NFE TRANSFAC yes 35743570
chr1 225650687 225650691 SRF TRANSFAC yes 35743571
Genes associated with rs549051726[chr1:225650688], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More