EnhancerDB
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  3. rs549052203[chr1:168288442]
Enhancers that have rs549052203[chr1:168288442]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 168284665 168293419 enh27203
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Astrocyte Liver Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs549052203[chr1:168288442]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 168284456 168288871 ZNF274 GTRD no Cervix (HeLa-S3) 21347391
chr1 168286883 168288991 ZNF274 GTRD no Cervix (HeLa-S3) 21347403
chr1 168287692 168289164 AR GTRD no Prostate (PC-3) 21347409
chr1 168287856 168289065 ZNF274 GTRD no Cervix (HeLa-S3) 21347410
chr1 168288026 168289087 ZNF274 GTRD no Cervix (HeLa-S3) 21347411
chr1 168288037 168288996 ZNF274 GTRD no Cervix (HeLa-S3) 21347412
chr1 168288051 168289014 ZNF274 GTRD no Cervix (HeLa-S3) 21347413
chr1 168288123 168288967 ZNF274 GTRD no Cervix (HeLa-S3) 21347414
chr1 168288133 168289110 ZNF274 GTRD no Cervix (HeLa-S3) 21347415
chr1 168288139 168289049 ZNF274 GTRD no Cervix (HeLa-S3) 21347416
chr1 168288279 168288906 ZNF274 GTRD no Cervix (HeLa-S3) 21347417
chr1 168288304 168288868 ZNF274 GTRD no Cervix (HeLa-S3) 21347418
chr1 168288315 168288951 ZNF274 GTRD no Cervix (HeLa-S3) 21347419
chr1 168288317 168288722 ZNF274 GTRD no Cervix (HeLa-S3) 21347420
chr1 168288340 168288912 ZNF274 GTRD no Cervix (HeLa-S3) 21347421
chr1 168288434 168288447 HSF2 JASPAR yes 32913325
chr1 168288438 168288453 FOXA1 JASPAR yes 32913326
chr1 168288440 168288452 FOXC2 JASPAR yes 32913327
chr1 168288441 168288452 FOXB1 JASPAR yes 32913328
chr1 168288441 168288452 FOXC1 JASPAR yes 32913329
chr1 168288442 168288446 YY1 TRANSFAC yes 32913330
Genes associated with rs549052203[chr1:168288442], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More