EnhancerDB
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  3. rs549082815[chr2:28942775]
Enhancers that have rs549082815[chr2:28942775]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28928585 28946675 enh18396
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs549082815[chr2:28942775]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28942759 28942780 IRF1 JASPAR yes 72673518
chr2 28942760 28942775 FOXP1 JASPAR yes 72673519
chr2 28942763 28942778 PRDM1 JASPAR yes 72673520
chr2 28942763 28942778 STAT2 JASPAR yes 72673521
Genes associated with rs549082815[chr2:28942775], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More