EnhancerDB
  1. Home
  2. SNP
  3. rs549083325[chr17:38771305]
Enhancers that have rs549083325[chr17:38771305]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38750565 38781175 enh17142
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs549083325[chr17:38771305]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38770751 38771719 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756723
chr17 38770751 38771719 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108257656
chr17 38770751 38771719 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108257657
chr17 38770890 38771345 TCF7L2 GTRD no Colon (HCT116) 108257658
chr17 38771297 38771308 USF2 JASPAR yes 54232466
chr17 38771298 38771308 MAX JASPAR yes 54232467
chr17 38771304 38771316 POU3F1 JASPAR yes 54232468
chr17 38771305 38771317 POU2F1 JASPAR yes 54232469
Genes associated with rs549083325[chr17:38771305], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More