EnhancerDB
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  3. rs549083477[chr17:25844577]
Enhancers that have rs549083477[chr17:25844577]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25838865 25883455 enh17064
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs549083477[chr17:25844577]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25844565 25844579 PLAG1 JASPAR yes 53639891
chr17 25844570 25844577 E2F1 TRANSFAC yes 53639892
chr17 25844573 25844587 GLIS3 JASPAR yes 53639893
Genes associated with rs549083477[chr17:25844577], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More