EnhancerDB
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  3. rs549127795[chr12:105848369]
Enhancers that have rs549127795[chr12:105848369]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 105835665 105865198 enh29945
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Astrocyte Bone (Osteoblast) Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs549127795[chr12:105848369]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 105847881 105848992 SOX2 GTRD no Neural Stem Cells (H9) 21569886
chr12 105847884 105848893 SOX2 GTRD no Neural Stem Cells (H9) 21569887
chr12 105847957 105848876 SOX2 GTRD no Neural Stem Cells (H9) 21569888
chr12 105847962 105848856 SOX2 GTRD no Neural Stem Cells (H9) 21569889
chr12 105848237 105848764 SOX2 GTRD no Neural Stem Cells (H9) 21569890
chr12 105848362 105848372 SP1 JASPAR yes 123445246
chr12 105848364 105848370 MAZ TRANSFAC yes 123445247
Genes associated with rs549127795[chr12:105848369], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More