EnhancerDB
  1. Home
  2. SNP
  3. rs549164183[chr4:86408424]
Enhancers that have rs549164183[chr4:86408424]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 86405985 86423917 enh8051
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Uterus Epithelial (MCF-7)
Transcript factors that have rs549164183[chr4:86408424]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 86408411 86408426 FOXA1 JASPAR yes 90998978
chr4 86408412 86408424 FOXC2 JASPAR yes 90998981
chr4 86408412 86408424 MEF2A JASPAR yes 90998982
chr4 86408413 86408425 FOXI1 JASPAR yes 90998983
chr4 86408420 86408435 FOXA1 JASPAR yes 90998987
chr4 86408421 86408433 FOXI1 JASPAR yes 90998988
chr4 86408422 86408434 FOXC2 JASPAR yes 90998989
chr4 86408422 86408436 ONECUT3 JASPAR yes 90998990
chr4 86408423 86408434 FOXB1 JASPAR yes 90998991
chr4 86408423 86408434 FOXC1 JASPAR yes 90998992
chr4 86408424 86408428 YY1 TRANSFAC yes 90998993
Genes associated with rs549164183[chr4:86408424], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More