EnhancerDB
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  3. rs549166930[chr7:129625466]
Enhancers that have rs549166930[chr7:129625466]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 129606945 129633015 enh24505
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Uterus Thymus Heart
Transcript factors that have rs549166930[chr7:129625466]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 129625460 129625481 IRF1 JASPAR yes 17996383
chr7 129625461 129625482 IRF1 JASPAR yes 17996384
chr7 129625462 129625483 IRF1 JASPAR yes 17996385
chr7 129625463 129625478 FOXP1 JASPAR yes 17996386
chr7 129625463 129625484 IRF1 JASPAR yes 17996387
chr7 129625464 129625485 IRF1 JASPAR yes 17996388
chr7 129625465 129625480 FOXP1 JASPAR yes 17996389
chr7 129625465 129625486 IRF1 JASPAR yes 17996390
chr7 129625466 129625481 FOXP1 JASPAR yes 17996391
chr7 129625466 129625487 IRF1 JASPAR yes 17996392
Genes associated with rs549166930[chr7:129625466], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More