EnhancerDB
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  3. rs549175943[chr1:20823046]
Enhancers that have rs549175943[chr1:20823046]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 20817763 20825479 enh11584
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Breast Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Heart
Transcript factors that have rs549175943[chr1:20823046]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 20823032 20823047 NR2C2 JASPAR yes 27251054
chr1 20823033 20823047 RXRB JASPAR yes 27251055
chr1 20823033 20823047 RXRG JASPAR yes 27251056
chr1 20823042 20823047 SP1 TRANSFAC yes 27251057
chr1 20823045 20823050 SP1 TRANSFAC yes 27251058
Genes associated with rs549175943[chr1:20823046], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More