EnhancerDB
  1. Home
  2. SNP
  3. rs549208023[chr12:52600535]
Enhancers that have rs549208023[chr12:52600535]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs549208023[chr12:52600535]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52600518 52600849 ZNF143 GTRD no Epithelial (MCF-7) 21546662
chr12 52600532 52600547 HNF4G JASPAR yes 120927858
chr12 52600533 52600547 NR2F1 JASPAR yes 120927859
chr12 52600533 52600548 HNF4A JASPAR yes 120927860
Genes associated with rs549208023[chr12:52600535], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More