EnhancerDB
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  3. rs549271909[chr5:148293717]
Enhancers that have rs549271909[chr5:148293717]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 148282079 148299015 enh22690
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Heart
chr5 148293572 148293925 vista49576
VISTA
Transcript factors that have rs549271909[chr5:148293717]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 148293710 148293727 BCL6B JASPAR yes 66773159
chr5 148293710 148293727 BCL6B JASPAR yes 70735411
chr5 148293713 148293719 NFIC JASPAR yes 66773160
chr5 148293713 148293719 NFIC JASPAR yes 70735412
chr5 148293716 148293727 FLI1 JASPAR yes 66773161
chr5 148293716 148293727 FLI1 JASPAR yes 70735413
chr5 148293717 148293725 FEV JASPAR yes 66773162
chr5 148293717 148293725 FEV JASPAR yes 70735414
Genes associated with rs549271909[chr5:148293717], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More