EnhancerDB
  1. Home
  2. SNP
  3. rs549278959[chr1:113536690]
Enhancers that have rs549278959[chr1:113536690]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 113523667 113552555 enh569
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Ovary Blood (OCI-LY7) Stomach Muscle (A673) Blood (Karpas-422) Lung (PC-9) Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs549278959[chr1:113536690]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 113536683 113536695 HES5 JASPAR yes 31605008
chr1 113536683 113536695 HES7 JASPAR yes 31605009
chr1 113536683 113536703 TP63 JASPAR yes 31605010
chr1 113536684 113536694 TFEB JASPAR yes 31605011
chr1 113536684 113536695 USF2 JASPAR yes 31605012
chr1 113536684 113536702 TP73 JASPAR yes 31605013
chr1 113536690 113536704 TLX1 JASPAR yes 31605014
Genes associated with rs549278959[chr1:113536690], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More