EnhancerDB
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  3. rs549286076[chr17:25881289]
Enhancers that have rs549286076[chr17:25881289]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25838865 25883455 enh17064
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs549286076[chr17:25881289]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25881280 25881295 MEF2C JASPAR yes 53644915
chr17 25881281 25881296 MEF2A JASPAR yes 53644917
chr17 25881282 25881294 MEF2A JASPAR yes 53644918
chr17 25881282 25881294 MEF2B JASPAR yes 53644919
chr17 25881282 25881294 MEF2D JASPAR yes 53644920
chr17 25881283 25881293 MEF2A JASPAR yes 53644921
chr17 25881283 25881295 FOXI1 JASPAR yes 53644922
chr17 25881284 25881289 TBP TRANSFAC yes 53644924
chr17 25881284 25881290 TMF TRANSFAC yes 53644925
Genes associated with rs549286076[chr17:25881289], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More