EnhancerDB
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  3. rs549317342[chr1:25064758]
Enhancers that have rs549317342[chr1:25064758]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549317342[chr1:25064758]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25064750 25064765 MEF2A JASPAR yes 27525726
chr1 25064751 25064763 MEF2A JASPAR yes 27525727
chr1 25064758 25064769 FOXB1 JASPAR yes 27525728
Genes associated with rs549317342[chr1:25064758], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More