EnhancerDB
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  3. rs549333260[chr16:10596983]
Enhancers that have rs549333260[chr16:10596983]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 10589105 10610795 enh69043
Bone Marrow (K562) Prostate (PC-3) Ovary Peripheral Blood (MM.1S) Uterus Lung (PC-9) Pancreas Neural Stem Cells (H9) Stomach
Transcript factors that have rs549333260[chr16:10596983]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 10592842 10597572 ZNF143 GTRD no Epithelial (MCF-7) 108178623
chr16 10596517 10597015 ZNF274 GTRD no Cervix (HeLa-S3) 108178624
chr16 10596629 10597670 ZNF143 GTRD no Epithelial (MCF-7) 108178625
chr16 10596712 10597735 ZNF274 GTRD no Blood (GM12878) 108178627
chr16 10596788 10597743 ZNF274 GTRD no Blood (GM12878) 108178628
chr16 10596807 10597734 ZNF274 GTRD no Cervix (HeLa-S3) 108178629
chr16 10596818 10597595 ZBTB33 GTRD no Lung (A549) 108178630
chr16 10596830 10597849 ZNF274 GTRD no Blood (GM12878) 108178631
chr16 10596854 10597761 ZBTB33 GTRD no Lung (A549) 108178632
chr16 10596887 10597687 ZNF274 GTRD no Liver (HepG2) 108178633
chr16 10596897 10598818 ZNF274 GTRD no Cervix (HeLa-S3) 108178634
chr16 10596939 10597603 ZNF274 GTRD no Blood (GM12878) 108178635
chr16 10596975 10596996 IRF1 JASPAR yes 9445055
chr16 10596977 10596998 IRF1 JASPAR yes 9445056
chr16 10596978 10596999 IRF1 JASPAR yes 9445057
chr16 10596979 10597000 IRF1 JASPAR yes 9445058
chr16 10596980 10596995 FOXP1 JASPAR yes 9445059
chr16 10596982 10596997 FOXP1 JASPAR yes 9445060
chr16 10596983 10596998 FOXP1 JASPAR yes 9445061
Genes associated with rs549333260[chr16:10596983], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More