EnhancerDB
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  3. rs549336482[chr12:125173033]
Enhancers that have rs549336482[chr12:125173033]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125156845 125176489 enh15094
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549336482[chr12:125173033]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125172987 125173702 TCF7L2 GTRD no Colon (HCT116) 21581734
chr12 125173025 125173330 ZNF274 GTRD no Cervix (HeLa-S3) 21581735
chr12 125173028 125173041 ZBTB18 JASPAR yes 124409002
Genes associated with rs549336482[chr12:125173033], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More