EnhancerDB
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  3. rs549351796[chr18:56463011]
Enhancers that have rs549351796[chr18:56463011]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56442885 56463415 enh17747
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Stomach Muscle (A673) Placenta Pancreas (Panc1) Lung (PC-9) Breast Spleen Uterus Heart
Transcript factors that have rs549351796[chr18:56463011]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56462997 56463011 PLAG1 JASPAR yes 110978330
chr18 56463005 56463014 THAP1 JASPAR yes 110978333
chr18 56463008 56463012 LFA1 TRANSFAC yes 110978334
Genes associated with rs549351796[chr18:56463011], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More