EnhancerDB
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  3. rs549352310[chr17:4753820]
Enhancers that have rs549352310[chr17:4753820]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 4739171 4760073 enh16944
Bone Marrow (K562) Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 4753672 4753828 vista23808
VISTA
Transcript factors that have rs549352310[chr17:4753820]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 4753814 4753824 ZNF740 JASPAR yes 21188802
chr17 4753814 4753824 ZNF740 JASPAR yes 52858338
chr17 4753814 4753829 NR2C2 JASPAR yes 21188803
chr17 4753814 4753829 NR2C2 JASPAR yes 52858339
chr17 4753815 4753825 SP1 JASPAR yes 21188804
chr17 4753815 4753825 SP1 JASPAR yes 52858340
chr17 4753815 4753826 E2F4 JASPAR yes 21188805
chr17 4753815 4753826 E2F4 JASPAR yes 52858341
chr17 4753818 4753824 SP1 TRANSFAC yes 21188806
chr17 4753818 4753824 SP1 TRANSFAC yes 52858342
chr17 4753818 4753828 SP1 JASPAR yes 21188807
chr17 4753818 4753828 SP1 JASPAR yes 52858343
chr17 4753820 4753825 SP1 TRANSFAC yes 21188808
chr17 4753820 4753825 SP1 TRANSFAC yes 52858344
Genes associated with rs549352310[chr17:4753820], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More